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SRX1963554: Bradyrhizobium elkanii USDA 76
1 ILLUMINA (Illumina HiSeq 2000) run: 170.9M spots, 34.2G bases, 21.3Gb downloads

External Id: JGI-SRA-21159
Submitted by: DOE Joint Genome Institute (JGI)
Study: Bradyrhizobium elkanii USDA 76 Genome sequencing and assembly
show Abstracthide Abstract
Root Nodulating Bacteria (RNB) are soil inhabiting bacteria that form symbioses with legumes after infection of root hairs. The 'GEBA-RNB' initiative at the JGI aims to sequence 100 RNB strains isolated from various locations around the world. This project will support the systematic sequence-based studies and understanding of the biogeographical effects on species evolution as well as the mechanisms of symbiotic nitrogen fixation (SNF) by RNB. The latter is a significant asset for world agricultural productivity, farming economy and environmental sustainability. SNF reduces energy consumption required to produce nitrogenous fertilizer, saving $US 6.8 billion per year. SNF significantly reduces greenhouse gas emissions compared to intensive agriculture practice using artificial N-input. SNF benefits the environment (reduces dry-land salinity, increases soil fertility, and prevents waterway eutrophication). Root endosymbioses promote carbon sequestration. Shared genetic mechanisms between fungal and bacterial root endosymbioses exist and a detailed understanding of endosymbionts will be beneficial to drive bioenergy development from trees. The GEBA-RNB project is based on collaboration between JGI and an international consortium from 15 countries coordinated by Wayne Reeve from Murdoch University, Australia.
Sample: MIGS Cultured Bacterial/Archaeal sample from Bradyrhizobium elkanii USDA 76
SAMN02261261 • SRS1573154 • All experiments • All runs
Library:
Name: HZOG
Instrument: Illumina HiSeq 2000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Std PE Unamplified
Runs: 1 run, 170.9M spots, 34.2G bases, 21.3Gb
Run# of Spots# of BasesSizePublished
SRR3934164170,914,26934.2G21.3Gb2016-07-20

ID:
2827188

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